Porites astreoides RNA/DNA Extractions for RNA Seq Test

Extracting DNA and RNA from Porites astreoides corals for genome project to use the RNA for new Zymo Ribo-free RNASeq test kit

Samples

G1-4
G1-13
Hot # 3 1/2 salinity
TA-Amb 1
TA-Amb 2
TA-HOT 2

Followed exact protocol Kevin Wong had done previously on other samples for these corals

Note: very hard to remove tissue from these corals, did not scrape or chip off easily and some were wet/mucousy even though they were taken quickly from the -80

Qubit, Gel and TapeStation

Qubit, gel, and tapestation were all done by Erin Chille on 8-20-19

Qubit:

all values are in ng/ul

Sample DNA 1 DNA 2 RNA 1 RNA 2
G1-4 15 15 26.6 26.6
G1-13 15.5 15.5 27.8 26.6
Hot #3 1/2 salinity 8.84 8.82 18.8 18.6
TA-Amb 1 32.2 32.2 31.4 31.4
TA-Amb 2 33 32.8 31.4 31.6
TA-Hot 2 30.4 30.4 15.4 15.4

Gel

1

RNA TapeStation

Full results include a sperm sample from a different project

ts

Written on August 19, 2019