Porites astreoides RNA/DNA Extractions for RNA Seq Test
Extracting DNA and RNA from Porites astreoides corals for genome project to use the RNA for new Zymo Ribo-free RNASeq test kit
Samples
G1-4
G1-13
Hot # 3 1/2 salinity
TA-Amb 1
TA-Amb 2
TA-HOT 2
Followed exact protocol Kevin Wong had done previously on other samples for these corals
Note: very hard to remove tissue from these corals, did not scrape or chip off easily and some were wet/mucousy even though they were taken quickly from the -80
Qubit, Gel and TapeStation
Qubit, gel, and tapestation were all done by Erin Chille on 8-20-19
Qubit:
all values are in ng/ul
Sample | DNA 1 | DNA 2 | RNA 1 | RNA 2 |
---|---|---|---|---|
G1-4 | 15 | 15 | 26.6 | 26.6 |
G1-13 | 15.5 | 15.5 | 27.8 | 26.6 |
Hot #3 1/2 salinity | 8.84 | 8.82 | 18.8 | 18.6 |
TA-Amb 1 | 32.2 | 32.2 | 31.4 | 31.4 |
TA-Amb 2 | 33 | 32.8 | 31.4 | 31.6 |
TA-Hot 2 | 30.4 | 30.4 | 15.4 | 15.4 |
Gel
RNA TapeStation
Full results include a sperm sample from a different project
Written on August 19, 2019